hm. looks good.
should be enough because there is always a block for every domain which tells apache to take th right php.ini.
for the master process it's this one:
Code:
<IfModule mod_fcgid.c>
<Directory /var/www/ispcp/gui>
FCGIWrapper /var/www/fcgi/master/php5-fcgi-starter .php
Options +ExecCGI
</Directory>
<Directory "/var/www/fcgi/master">
AllowOverride None
Options +ExecCGI MultiViews -Indexes
Order allow,deny
Allow from all
</Directory>
</IfModule>
Just to be sure: is fcgi_ispcp.conf also enabled in the mod-folder of apache (is a configuration fpr fcgid - not an own module).
Do you have the problem also with the master process?
(put a phpinfo file in the ispcp-gui folder and test...)